STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1985Homologs of previously reported genes of unknown function. (560 aa)    
Predicted Functional Partners:
XM1_1984
Uncharacterized protein; Homologs of previously reported genes of unknown function.
       0.784
XM1_2337
Homologs of previously reported genes of unknown function.
  
     0.716
XM1_2360
Putative CheY-like receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
    0.689
XM1_1277
Putative 60S ribosomal protein L22; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.663
XM1_1275
Conserved protein of unknown function（NERD,16-109） Homologs of previously reported genes of unknown function.
  
     0.658
XM1_2364
Homologs of previously reported genes of unknown function.
  
 
   0.635
XM1_3690
Putative two-component response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
   0.630
XM1_4202
Conserved protein of unknown function (Integrase-like, catalytic core 247-449); Homologs of previously reported genes of unknown function.
  
    0.625
XM1_1983
Putative Phosphopantetheinyl transferase(4'-phosphopantetheinyl transferase,81-181); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the P-Pant transferase superfamily.
 
     0.621
XM1_4304
Conserved protein of unknown function (Concanavalin A-like lectin/glucanases superfamily; Homologs of previously reported genes of unknown function.
 
     0.618
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.