STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_1986Protein of unknown function; No homology to any previously reported sequences. (57 aa)    
Predicted Functional Partners:
XM1_1987
Putative nucleoside-diphosphate-sugar epimerase(Hopanoid-associated sugar epimerase,4-328); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.752
XM1_1988
Glycosyltransferase(Glycosyl transferase, family 2, hopene-associated, HpnB,7-379); Function of strongly homologous gene; enzyme.
       0.752
XM1_1989
Putative phytoene synthase(Squalene/phytoene synthase HpnD,23-288); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.752
shc
Squalene--hopene cyclase(Hopene cyclase,21-640); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.682
XM1_1991
Putative Nucleoside phosphorylase(Hopanoid-associated phosphorylase HpnG,22-224); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.682
XM1_1984
Uncharacterized protein; Homologs of previously reported genes of unknown function.
       0.556
XM1_1985
Homologs of previously reported genes of unknown function.
       0.556
XM1_1981
Homologs of previously reported genes of unknown function.
       0.416
XM1_1982
Putative non-ribosomal peptide synthetase(Non-ribosomal peptide synthetase C-terminal,627-1318); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.416
XM1_1983
Putative Phosphopantetheinyl transferase(4'-phosphopantetheinyl transferase,81-181); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the P-Pant transferase superfamily.
       0.416
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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