STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2002Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (484 aa)    
Predicted Functional Partners:
XM1_2003
Flavin-nucleotide-binding protein; Function of strongly homologous gene; putative enzyme.
 
    0.783
XM1_2001
ABC-type phosphate transport system; Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.520
XM1_2004
Putative Glyoxalase/bleomycin resistance protein/dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.511
gadX-2
DNA-binding transcriptional dual regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
 0.480
XM1_1956
Conserved protein of unknown function（Carboxymuconolactone decarboxylase,13-94） Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.469
phoB
Two-component system, OmpR family, phosphate regulon response regulator PhoB; Function of homologous gene experimentally demonstrated in an other organism; regulator.
     
 0.417
guaA
GMP synthetase (glutamine aminotransferase); Catalyzes the synthesis of GMP from XMP.
     
 0.415
pstC-2
Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.406
rffG
dTDP-glucose 4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
    0.405
phoU-2
Phosphate-specific transport system accessory protein PhoU; Plays a role in the regulation of phosphate uptake.
       0.401
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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