STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2010Putative Fe-S oxidoreductase; Function of strongly homologous gene; putative enzyme. (449 aa)    
Predicted Functional Partners:
XM1_2009
Homologs of previously reported genes of unknown function.
     0.981
XM1_2011
Rubrerythrin; Function of strongly homologous gene; phenotype.
 
  
 0.905
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Function of strongly homologous gene; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.902
plsY
Glycerol-3-phosphate acyltransferase(Glycerol-3-phosphate acyltransferase,10-184); Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
  0.900
lutB
L-lactate dehydrogenase complex protein LldF; Function of strongly homologous gene; enzyme.
 
 
 0.867
XM1_3880
Putative D-lactate dehydrogenase, mitochondrial; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.865
lutC
Lactate utilization protein C; Function of strongly homologous gene; enzyme.
 
 
 0.800
XM1_0737
Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
  0.800
XM1_1102
Putative diacylglycerol kinase（Diacylglycerol/lipid kinase,21-310); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
  0.800
XM1_4312
Putative rubrerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
  
 0.765
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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