STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2046Signal transduction protein; Function of strongly homologous gene; transporter. (593 aa)    
Predicted Functional Partners:
XM1_1906
Uncharacterized protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.894
XM1_2972
Putative two component diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 0.893
XM1_1922
Putative PAS:GGDEF (Cache domain,34-127; PAS domain,277-392; GGDEF domain,386-558); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
 0.871
XM1_2449
Putative hybrid sensor and regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.865
XM1_4030
Putative hybrid sensor and regulator (Signal transduction histidine kinase, homodimeric 904-989; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.865
XM1_1945
Putative Adenylyl cyclase（Adenylyl cyclase class-3/4/guanylyl cyclase,166-326） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.857
XM1_3971
Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.854
XM1_1675
Putative GGDEF domain(GGDEF domain,422-606); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
 
 0.853
XM1_3681
Response regulator; Function of strongly homologous gene; regulator.
 
 
 0.852
XM1_3623
Response regulator containing a CheY-like receiver domain and a GGDEF domain (fragment); Function of strongly homologous gene; enzyme.
 
 
 0.845
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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