STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2054BFD-like (2Fe-2S)-binding domain-containing protein; Function of strongly homologous gene; cell process. (69 aa)    
Predicted Functional Partners:
bfr-4
Bacterioferritin, iron storage and detoxification protein; Iron-storage protein.
  
 
 0.819
bfr-2
Bacterioferritin, iron storage and detoxification protein(Ferritin-related,1-155); Iron-storage protein.
  
 
 0.758
XM1_2055
Homologs of previously reported genes of unknown function.
       0.741
bfr
Bacterioferritin, iron storage and detoxification protein(Bacterioferritin,1-156); Iron-storage protein.
  
 
 0.653
bfr-3
Bacterioferritin, iron storage and detoxification protein; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the bacterioferritin family.
  
 
 0.653
XM1_0418
Putative Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.626
XM1_4122
Periplasmic protein TonB, links inner and outer membranes; Function of strongly homologous gene; membrane component.
  
  
 0.452
XM1_4405
Periplasmic protein TonB; Function of strongly homologous gene; membrane component.
  
  
 0.452
XM1_4543
Putative TonB family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.452
XM1_4545
Conserved protein of unknown function (Cytochrome c domain 279-445); Homologs of previously reported genes of unknown function.
  
    0.445
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.