STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2135Hemerythrin-like protein; Homologs of previously reported genes of unknown function. (139 aa)    
Predicted Functional Partners:
XM1_2950
Putative bacterial hemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.747
XM1_3647
Hemerythrin; Function of strongly homologous gene; carrier.
  
     0.718
XM1_0622
Conserved protein of unknown function (Haemerythrin-like, metal-binding); Homologs of previously reported genes of unknown function.
  
     0.714
XM1_1669
Conserved protein of unknown function(Haemerythrin-like, metal-binding,1-130); Homologs of previously reported genes of unknown function.
  
     0.711
XM1_4506
Hemerythrin-like metal-binding protein; Function of strongly homologous gene; transporter.
  
     0.702
XM1_1257
ABC transporter; Function of strongly homologous gene; transporter.
  
     0.690
XM1_1779
Conserved protein of unknown function(Haemerythrin-like, metal-binding,1-132); Homologs of previously reported genes of unknown function.
  
     0.682
XM1_3471
Hemerythrin-like protein; Function of strongly homologous gene; carrier.
  
     0.671
XM1_2382
Putative bacterial hemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.662
XM1_2985
Putative haemerythrin-like, metal-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
     0.652
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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