STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nosHPolyferredoxin; Function of strongly homologous gene; transporter. (320 aa)    
Predicted Functional Partners:
nosG
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; enzyme.
 
 
 0.966
napB
Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
  
 0.955
XM1_2145
Nitrous oxidase accessory protein; Homologs of previously reported genes of unknown function.
 
  
 0.947
XM1_2144
Homologs of previously reported genes of unknown function.
 
  
 0.920
nosY
Membrane protein nosY; Function of strongly homologous gene; transporter.
 
  
 0.915
nosL
Nitrous oxide reductase accessory protein; Function of strongly homologous gene; enzyme.
 
  
 0.907
nosF
ABC-type multidrug transport system, ATPase component; Function of strongly homologous gene; enzyme.
 
  
 0.893
napD
Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
 
  
 0.887
napA
Nitrate reductase, periplasmic, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
 
  
 0.877
napG
Ferredoxin-type protein napG homolog; Function of strongly homologous gene; carrier.
  
 0.860
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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