STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2182Protein of unknown function; No homology to any previously reported sequences. (55 aa)    
Predicted Functional Partners:
XM1_2181
Putative Fe-S-cluster-containing hydrogenase components 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
       0.605
aor
Tungsten-containing aldehyde ferredoxin oxidoreductase; Function of strongly homologous gene; enzyme.
       0.575
XM1_2183
Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.519
XM1_2179
Putative NADH dependant phenylglyoxylate; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.457
XM1_2176
Homologs of previously reported genes of unknown function.
       0.432
XM1_2177
Homologs of previously reported genes of unknown function.
       0.432
XM1_2178
Putative NAD(FAD)-dependent dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.432
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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