STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2187Putative Chromosome partitioning ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (344 aa)    
Predicted Functional Partners:
parB-2
Chromosome-partitioning protein ParB; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ParB family.
 
 
 0.890
XM1_1929
Putative protein parA (CobQ/CobB/MinD/ParA nucleotide binding domain,6-168); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
   
 0.634
parB
Plasmid partitioning protein; Function of strongly homologous gene; enzyme.
 
 
 0.607
XM1_2186
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
    0.581
XM1_0038
Putative dna modification methylase protein (phage related); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.579
ftsK
DNA translocase FtsK; Function of homologous gene experimentally demonstrated in an other organism; cell process.
  
  
 0.535
XM1_0096
Putative RNA polymerase sigma factor, sigma-70 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 
 0.523
XM1_2616
Putative Phage related DNA methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.523
XM1_4041
Putative ParB-like protein (nuclease); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 
 0.523
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
 
  
 0.497
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.