STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2197Homologs of previously reported genes of unknown function. (133 aa)    
Predicted Functional Partners:
XM1_0611
Homologs of previously reported genes of unknown function.
  
     0.695
XM1_2198
Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.691
XM1_2083
Homologs of previously reported genes of unknown function.
  
     0.664
XM1_1230
Uncharacterized protein; Homologs of previously reported genes of unknown function.
  
     0.602
XM1_4780
Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.587
XM1_1534
Putative flagellar protein FlgJ, N-terminal(Flagellar protein FlgJ, N-terminal,51-98); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
     0.548
fliH
Putative metal-binding protein CopG protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.538
XM1_1536
Putative Flagellar assembly regulator FliX(Flagellar assembly regulator FliX, class II,1-141); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.536
XM1_2052
Homologs of previously reported genes of unknown function.
  
     0.520
XM1_1367
Putative TadE-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
     0.517
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.