Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XM1_0305 | XM1_1064 | XM1_0305 | XM1_1064 | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | 0.999 |
| XM1_0305 | XM1_2198 | XM1_0305 | XM1_2198 | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.855 |
| XM1_0305 | boxA | XM1_0305 | XM1_1071 | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Benzoyl-CoA oxygenase component A; Function of strongly homologous gene; enzyme. | 0.470 |
| XM1_0305 | hoxF | XM1_0305 | XM1_4290 | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | NAD-reducing hydrogenase HoxS subunit alpha (HoxF); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.999 |
| XM1_1064 | XM1_0305 | XM1_1064 | XM1_0305 | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
| XM1_1064 | XM1_2198 | XM1_1064 | XM1_2198 | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.889 |
| XM1_1064 | boxA | XM1_1064 | XM1_1071 | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | Benzoyl-CoA oxygenase component A; Function of strongly homologous gene; enzyme. | 0.644 |
| XM1_1064 | hoxF | XM1_1064 | XM1_4290 | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | NAD-reducing hydrogenase HoxS subunit alpha (HoxF); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.998 |
| XM1_1064 | ndk | XM1_1064 | XM1_4418 | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | Nucleoside diphosphate kinase ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.440 |
| XM1_2198 | XM1_0305 | XM1_2198 | XM1_0305 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.855 |
| XM1_2198 | XM1_1064 | XM1_2198 | XM1_1064 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Formate dehydrogenase beta subunit; Function of strongly homologous gene; enzyme. | 0.889 |
| XM1_2198 | boxA | XM1_2198 | XM1_1071 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Benzoyl-CoA oxygenase component A; Function of strongly homologous gene; enzyme. | 0.850 |
| XM1_2198 | hoxF | XM1_2198 | XM1_4290 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | NAD-reducing hydrogenase HoxS subunit alpha (HoxF); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.889 |
| XM1_2198 | mazG | XM1_2198 | XM1_3186 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Nucleoside triphosphate pyrophosphohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.900 |
| XM1_2198 | moaA | XM1_2198 | XM1_1049 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Cyclic pyranopterin monophosphate synthase(Molybdenum cofactor biosynthesis protein A,1-328); Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.840 |
| XM1_2198 | ndk | XM1_2198 | XM1_4418 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Nucleoside diphosphate kinase ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.928 |
| XM1_2198 | pyk | XM1_2198 | XM1_3954 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Pyruvate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family. | 0.909 |
| XM1_2198 | ribB | XM1_2198 | XM1_3125 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.886 |
| XM1_2198 | spoT | XM1_2198 | XM1_3074 | Putative Ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.901 |
| boxA | XM1_0305 | XM1_1071 | XM1_0305 | Benzoyl-CoA oxygenase component A; Function of strongly homologous gene; enzyme. | Cytochrome b/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.470 |
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