STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2223Putative Terminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (546 aa)    
Predicted Functional Partners:
XM1_2220
Putative Phage portal protein, HK97 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.915
XM1_2222
Putative Major capsid protein HK97; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.874
XM1_2221
Putative Phage prohead protease, HK97 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.823
XM1_1752
Protein of unknown function（Bacteriophage APSE-1, protein 50,11-196） No homology to any previously reported sequences.
  
     0.765
XM1_1753
Protein of unknown function(Protein of unknown function DUF2800,9-401); No homology to any previously reported sequences.
  
     0.755
XM1_1749
Putative Phage-like DNA polymerase (DNA-directed DNA polymerase, family A, palm domain,221-474); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.731
XM1_0038
Putative dna modification methylase protein (phage related); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.726
XM1_2616
Putative Phage related DNA methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.724
XM1_2224
Homologs of previously reported genes of unknown function.
       0.541
XM1_2225
Protein of unknown function; No homology to any previously reported sequences.
       0.541
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.