STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2246Homologs of previously reported genes of unknown function. (871 aa)    
Predicted Functional Partners:
XM1_3056
Conserved protein of unknown function(containing CHAT domain,876-1217); Homologs of previously reported genes of unknown function.
 
 
 0.659
XM1_0773
Homologs of previously reported genes of unknown function.
  
     0.646
XM1_0774
Putative lipopolysaccharide core biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.646
XM1_3059
Conserved protein of unknown function(containing Haemerythrin-like, metal-binding domain.1-134); Homologs of previously reported genes of unknown function.
  
    0.640
XM1_3633
Protein of unknown function; No homology to any previously reported sequences.
  
 
   0.633
XM1_4740
Homologs of previously reported genes of unknown function.
  
     0.631
XM1_2985
Putative haemerythrin-like, metal-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
   0.626
XM1_3055
Putative Adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.615
XM1_3647
Hemerythrin; Function of strongly homologous gene; carrier.
  
    0.584
XM1_1478
Putative Sensor protein gacS(CheY-like superfamily,782-900;905-1026;1045-1177); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.567
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.