STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2276Putative Activator of lactoyl-CoA dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (291 aa)    
Predicted Functional Partners:
XM1_2274
Putative 3-methylbenzoyl-CoA reductase gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.965
mbdO
Putative 3-methylbenzoyl-CoA reductase beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.947
bcrC
Benzoyl-CoA reductase subunit C; Function of strongly homologous gene; putative enzyme.
 
 0.892
XM1_3815
Uncharacterized protein; Homologs of previously reported genes of unknown function.
 
 
 0.871
bcrB
Benzoyl-CoA reductase subunit B; Function of strongly homologous gene; enzyme.
 
 
 0.870
hgdC
ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    
0.807
XM1_2277
Medium-chain specific acyl-CoA dehydrogenase, mitochondrial; Function of strongly homologous gene; enzyme.
     
 0.780
XM1_2278
Homologs of previously reported genes of unknown function.
 
     0.650
XM1_2288
Putative 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.565
XM1_2898
Putative 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.561
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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