STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2291Putative MaoC-like dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (155 aa)    
Predicted Functional Partners:
dch
Putative Cyclohexa-1,5-dienecarbonyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.605
XM1_2288
Putative 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.605
XM1_2286
Putative Acetyl-CoA hydrolase/transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.603
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.556
XM1_2290
Protein of unknown function; No homology to any previously reported sequences.
       0.519
XM1_2283
Acyl-CoA dehydrogenase domain protein; Function of strongly homologous gene; enzyme.
 
 0.511
XM1_2292
Putative branched chain amino acid ABC transporter substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; receptor.
       0.500
fadB
3-hydroxyacyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.498
XM1_3447
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.468
boxC
Benzoyl-CoA-dihydrodiol lyase; Function of strongly homologous gene; enzyme.
 
 0.460
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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