STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2377Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (452 aa)    
Predicted Functional Partners:
XM1_2376
Putative transposase IS110 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.739
XM1_2378
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.532
XM1_2379
Protein of unknown function; No homology to any previously reported sequences.
       0.532
XM1_0946
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.445
XM1_1323
Putative Exopolysaccharide synthesis (Exopolysaccharide synthesis, ExoD,11-185); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.441
XM1_2280
Protein of unknown function; Required for the transposition of the insertion element.
 
   
 0.407
XM1_0251
Homologs of previously reported genes of unknown function.
  
     0.404
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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