STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2378Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (126 aa)    
Predicted Functional Partners:
XM1_2302
Conserved protein of unknown function (putative IS66 Orf2 like); Homologs of previously reported genes of unknown function.
 
   
 0.801
XM1_2379
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_2984
Protein of unknown function (putative transposes fragment); No homology to any previously reported sequences.
  
     0.766
XM1_2303
Protein of unknown function; No homology to any previously reported sequences.
  
     0.656
XM1_2377
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.532
XM1_2376
Putative transposase IS110 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.519
XM1_0044
Homologs of previously reported genes of unknown function.
 
     0.440
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.