STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2385Putative response regulator (containing hemerythrin-like metal-binding domain 10-134; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (459 aa)    
Predicted Functional Partners:
XM1_3070
Putative bacteriohemerythrin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.775
XM1_3959
Hemerythrin domain-containing protein; Homologs of previously reported genes of unknown function.
 
     0.775
XM1_3076
Conserved protein of unknown function(containing Haemerythrin-like, metal-binding domain, 1-128); Homologs of previously reported genes of unknown function.
 
     0.773
XM1_0550
Conserved protein of unknown function （Haemerythrin-like, metal-binding） Homologs of previously reported genes of unknown function.
 
     0.770
XM1_0622
Conserved protein of unknown function (Haemerythrin-like, metal-binding); Homologs of previously reported genes of unknown function.
 
     0.744
XM1_2449
Putative hybrid sensor and regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.593
XM1_4030
Putative hybrid sensor and regulator (Signal transduction histidine kinase, homodimeric 904-989; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
 
 0.593
XM1_2380
Putative CheY-like receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 
    
0.589
XM1_2061
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.533
XM1_2384
Putative PAS/PAC domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
   
   0.532
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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