STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mamYMagnetosome protein MamY; Function of strongly homologous gene; cell process. (378 aa)    
Predicted Functional Partners:
mamZ
Magnetosome protein MamZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using [...]
     
 0.776
mamX
Magnetosome protein MamX; Function of strongly homologous gene; membrane component.
     
 0.776
ftsZ-2
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.723
mamK
Magnetosome cytoskeleton protein MamK; Function of strongly homologous gene; putative enzyme.
      
 0.573
mms6
Magnetosome protein Mms6; Function of strongly homologous gene; enzyme.
      
 0.570
mamH
Magnetosome protein MamH; Function of strongly homologous gene; putative membrane component.
      
 0.570
mamE
Magnetosome protein MamE; Function of strongly homologous gene; putative enzyme.
      
 0.565
mamL
Magnetosome protein MamL; Function of strongly homologous gene; putative membrane component.
      
 0.563
mamF-2
Magnetosome protein MamF; Function of strongly homologous gene; enzyme.
      
 0.551
mamJ
Magnetosome protein MamJ; Function of strongly homologous gene; transporter.
      
 0.551
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.