STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
feoAFerrous iron transport system protein A; Function of strongly homologous gene; putative transporter. (106 aa)    
Predicted Functional Partners:
feoB
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.954
feoB-3
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.873
feoB-2
Fused ferrous iron transporter, protein B: GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
 
  
 0.838
XM1_2419
Putative Carbohydrate-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.774
feoA-2
Ferrous iron transporter, protein A; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
     0.649
mamO
Magnetosome protein MamO; Function of strongly homologous gene; putative enzyme.
 
   
 0.543
znuA
High-affinity zinc uptake system protein ZnuA; Function of strongly homologous gene; transporter.
     
 0.461
mamF-3
Magnetosome protein MamF; Function of strongly homologous gene; membrane component.
 
   
 0.423
XM1_2414
Homologs of previously reported genes of unknown function.
 
     0.408
XM1_2418
Putative transposase of ISAli3, IS630 family. ORFB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.403
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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