STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
XM1_2452Putative transposase of ISMex1, IS3 family (ORF 1); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (82 aa)    
Predicted Functional Partners:
XM1_2460
Putative Integrase, catalytic region (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.838
XM1_0017
Putative ISRSO14-transposase orfB protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.793
XM1_2470
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.791
XM1_2474
Conserved protein of unknown function (putative partial transposase of ISMex1, IS3 family (ORF 2)); Homologs of previously reported genes of unknown function.
   
 0.789
XM1_2453
Putative sugar nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.477
XM1_2454
Putative gamma-glutamyl-gamma-aminobutyrate hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.477
XM1_2455
Homologs of previously reported genes of unknown function.
       0.477
XM1_2456
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.477
XM1_2457
Putative Adenylyl-sulfate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the APS kinase family.
       0.477
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.