STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2453Putative sugar nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (246 aa)    
Predicted Functional Partners:
XM1_2455
Homologs of previously reported genes of unknown function.
 
  
 0.918
pepM
Phosphoenolpyruvate phosphomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    0.893
XM1_2454
Putative gamma-glutamyl-gamma-aminobutyrate hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.871
XM1_2457
Putative Adenylyl-sulfate kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the APS kinase family.
 
  
 0.832
XM1_2456
Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.784
XM1_1801
Putative Nucleotidyltransferase(Nucleotidyl transferase,11-234); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.645
XM1_1532
Putative Flagellar hook-associated protein(Flagellar hook-associated protein, FlgK,7-365); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the flagella basal body rod proteins family.
  
    0.594
XM1_2452
Putative transposase of ISMex1, IS3 family (ORF 1); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.477
serB
Phosphoserine phosphatase(Phosphoserine phosphatase SerB,78-287); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.456
XM1_2458
Protein of unknown function; No homology to any previously reported sequences.
       0.417
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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