STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2485Putative Hydantoin utilization protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (703 aa)    
Predicted Functional Partners:
XM1_2484
Putative 5-oxoprolinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.999
xdhA-2
Xanthine dehydrogenase, small subunit (fragment of part 1); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.798
yliK
methylmalonyl-CoA mutase (fragment of part 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.794
yliK-2
methylmalonyl-CoA mutase (fragment of part 1); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.792
XM1_2477
Putative CoA-transferase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the CoA-transferase III family.
 
     0.788
XM1_2478
Putative xanthine dehydrogenase, molybdenum binding subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.787
XM1_2483
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.776
xdhA
Xanthine dehydrogenase, small subunit (fragment of part 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.755
XM1_2487
Putative Beta-oxoacyl-CoA thiolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.754
XM1_2486
Putative ADP-producing CoA ligase, feruloyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.727
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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