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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2496Putative 3-hydroxylacyl-(Acyl carrier protein) dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (157 aa)    
Predicted Functional Partners:
XM1_2498
Putative 3-oxoacyl-(Acyl carrier protein) synthase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.943
fabG-2
3-oxoacyl-[acyl-carrier protein] reductase (3-ketoacyl-acyl carrier protein reductase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.942
XM1_2495
Putative Beta-ketoacyl synthase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.933
fabZ
(3R)-hydroxymyristol acyl carrier protein dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
   
 
 0.697
XM1_2494
Homologs of previously reported genes of unknown function.
       0.555
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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