STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2534Putative RND efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (786 aa)    
Predicted Functional Partners:
XM1_2533
Homologs of previously reported genes of unknown function.
 
  
 0.972
XM1_2536
Homologs of previously reported genes of unknown function.
 
  
 0.915
XM1_2535
Homologs of previously reported genes of unknown function.
 
  
 0.909
XM1_2524
Homologs of previously reported genes of unknown function.
 
     0.613
XM1_2526
Homologs of previously reported genes of unknown function.
 
     0.574
XM1_2531
Putative Quinohemoprotein amine dehydrogenase subunit alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.571
XM1_2527
Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
     0.569
XM1_2529
Quinohemoprotein amine dehydrogenase subunit gamma; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.552
XM1_2528
Putative Quinohemoprotein amine dehydrogenase 40 kDa subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.550
dhaS
Aldehyde dehydrogenase DhaS; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
       0.550
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.