STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2557Putative Outer membrane autotransporter barrel domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (978 aa)    
Predicted Functional Partners:
XM1_2558
Putative Esterase/lipase/thioesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.941
XM1_2559
Putative Wd40 repeat, subgroup; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.618
XM1_2555
Protein of unknown function; No homology to any previously reported sequences.
       0.572
XM1_0218
Putative Outer membrane protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
  
 0.541
XM1_0138
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
    
 
 0.516
XM1_4427
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
    
 
 0.516
XM1_2560
Homologs of previously reported genes of unknown function.
       0.463
XM1_3212
Protein of unknown function; No homology to any previously reported sequences.
 
   0.455
XM1_2020
Putative Zn-dependent protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   0.448
XM1_4085
PhageMin_Tail domain-containing protein; Homologs of previously reported genes of unknown function.
 
     0.422
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.