STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2599Protein of unknown function; No homology to any previously reported sequences. (112 aa)    
Predicted Functional Partners:
XM1_2598
Homologs of previously reported genes of unknown function.
       0.773
XM1_2600
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_2601
Homologs of previously reported genes of unknown function.
       0.727
XM1_2602
Putative Phage-related minor tail protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
       0.727
XM1_2596
Putative Phage-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.615
XM1_2597
Homologs of previously reported genes of unknown function.
       0.615
XM1_2604
Homologs of previously reported genes of unknown function.
       0.454
XM1_2592
Homologs of previously reported genes of unknown function.
       0.433
XM1_2593
Protein of unknown function; No homology to any previously reported sequences.
       0.433
XM1_2594
Putative lysozyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.433
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.