XM1_2608 protein (Magnetospirillum sp. XM1) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

XM1_2608

Homologs of previously reported genes of unknown function. (226 aa)

Predicted Functional Partners:

XM1_2607

0.949

XM1_2609

0.948

XM1_2606

0.931

XM1_2614

0.894

XM1_2612

0.887

XM1_2615

0.887

XM1_2623

0.825

XM1_0050

0.788

XM1_0042

0.785

XM1_0043

0.784

Your Current Organism:

Magnetospirillum sp. XM1

NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
XM1_0042	XM1_0043	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	0.950
XM1_0042	XM1_0050	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.795
XM1_0042	XM1_2606	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.778
XM1_0042	XM1_2607	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.781
XM1_0042	XM1_2608	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.785
XM1_0042	XM1_2609	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Homologs of previously reported genes of unknown function.	0.774
XM1_0042	XM1_2612	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative Phage portal protein, lambda family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.782
XM1_0042	XM1_2614	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Putative Prophage LambdaW4, terminase large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.787
XM1_0042	XM1_2623	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	Protein of unknown function; No homology to any previously reported sequences.	0.773
XM1_0043	XM1_0042	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.950
XM1_0043	XM1_0050	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.788
XM1_0043	XM1_2606	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.779
XM1_0043	XM1_2607	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.780
XM1_0043	XM1_2608	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.784
XM1_0043	XM1_2609	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Homologs of previously reported genes of unknown function.	0.775
XM1_0043	XM1_2612	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Putative Phage portal protein, lambda family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.	0.830
XM1_0043	XM1_2615	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Putative Terminase small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.768
XM1_0043	XM1_2623	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	Protein of unknown function; No homology to any previously reported sequences.	0.772
XM1_0050	XM1_0042	Homologs of previously reported genes of unknown function.	Conserved protein of unknown function (lambda repressor-like DNA-binding domains 80-176); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.	0.795
XM1_0050	XM1_0043	Homologs of previously reported genes of unknown function.	Bacteriophage tail assembly protein; No homology to any previously reported sequences.	0.788