STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2634Homologs of previously reported genes of unknown function. (192 aa)    
Predicted Functional Partners:
ssb
Single-stranded DNA-binding protein; Function of strongly homologous gene; cell process.
  
    0.815
XM1_2635
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_2637
Protein of unknown function; No homology to any previously reported sequences.
       0.773
xis
Putative Excisionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.773
int
Putative Integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family.
       0.773
XM1_2633
Homologs of previously reported genes of unknown function.
  
  
 0.533
XM1_1473
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.508
XM1_1107
Putative SAM-dependent methyltransferases(Methyltransferase type 11,91-139); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.502
XM1_3072
Conserved protein of unknown function(containing NYN domain, limkain-b1-type domain.8-165); Homologs of previously reported genes of unknown function.
 
     0.472
XM1_2632
Homologs of previously reported genes of unknown function.
       0.433
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (64%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.