STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrAMethionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (211 aa)    
Predicted Functional Partners:
msrB
Peptide methionine sulfoxide reductase MsrB; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.995
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.920
ccmG
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE; Function of strongly homologous gene; membrane component.
   
 0.766
XM1_2138
Putative Thiol-disulfide isomeras and thioredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
 0.766
XM1_3038
Thiol-disulfide isomerase and thioredoxins; Function of strongly homologous gene; enzyme.
   
 0.766
XM1_3559
Putative thiol-disulfide isomerase/thioredoxins-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.766
XM1_4130
Putative Thioredoxin (H-type,TRX-H); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.766
XM1_4258
Putative fused thiol:disulfide interchange protein: activator of DsbC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.740
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
  
 
 0.738
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
    
 0.699
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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