STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2663Homologs of previously reported genes of unknown function. (156 aa)    
Predicted Functional Partners:
XM1_2730
Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
  
  
 
0.921
cycA
Cytochrome C2(Cytochrome c domain,26-121); Function of strongly homologous gene; factor.
     
  0.900
XM1_4309
Cytochrome c2 iso-2; Function of strongly homologous gene; enzyme.
     
  0.900
XM1_2664
Protein of unknown function; No homology to any previously reported sequences.
       0.732
XM1_2662
Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.719
XM1_2661
Homologs of previously reported genes of unknown function.
 
     0.648
XM1_2666
Conserved protein of unknown function, containing STAS (AntiSigma factor antagonist) domain; Homologs of previously reported genes of unknown function; Belongs to the anti-sigma-factor antagonist family.
 
     0.544
XM1_2665
Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.466
XM1_2667
Protein of unknown function; No homology to any previously reported sequences.
       0.454
XM1_2905
Conserved protein of unknown function (Acyl-CoA N-acyltransferase 1-146; Homologs of previously reported genes of unknown function.
  
     0.441
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.