STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2909Putative serine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (648 aa)    
Predicted Functional Partners:
XM1_2910
Conserved protein of unknown function (Thermus phage phiYS40, Orf56 3-424); Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family.
 
  
 0.992
XM1_2911
Conserved protein of unknown function (Sporulation stage V, protein R 12-453); Homologs of previously reported genes of unknown function.
 
  
 0.992
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.692
XM1_3211
Putative 2,5-diketo-D-gluconic acid reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.674
XM1_2908
Protein of unknown function; No homology to any previously reported sequences.
       0.563
czcB
Cobalt-zinc-cadmium resistance protein CzcB; Function of strongly homologous gene; putative transporter.
   
  
 0.554
XM1_1301
Putative tryptophan repressor-binding protein wrbA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
    0.547
czcC
Trehalose-6-phosphate phosphatase, biosynthetic; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.520
napD
Chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
   
    0.428
XM1_0214
Conserved protein of unknown function (Peptidoglycan-binding lysin domain); Homologs of previously reported genes of unknown function.
   
  
 0.426
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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