STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY-3Chemotaxis regulator transmitting signal to flagellar motor component cheY; Function of strongly homologous gene; regulator. (128 aa)    
Predicted Functional Partners:
XM1_0440
Putative inhibitor of MCP methylation, CheC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
     
 0.902
cheA
Uncharacterized protein; Function of strongly homologous gene; enzyme.
 
0.811
XM1_4558
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.811
XM1_1590
Homologs of previously reported genes of unknown function.
 
 
 0.805
XM1_4377
Putative Protein phosphatase CheZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.804
cheW
Chemotaxis signal transduction protein（CheW-like protein,18-155） Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.791
XM1_4009
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.788
XM1_3256
Protein of unknown function; No homology to any previously reported sequences.
 
 
0.771
XM1_4319
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
0.771
cheA-2
Signal transduction histidine Kinases (STHK); Function of strongly homologous gene; putative regulator.
 
 0.762
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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