STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_2960Putative Integrase-like domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (161 aa)    
Predicted Functional Partners:
XM1_1623
Protein of unknown function (Integrase-like, catalytic core 264-462); No homology to any previously reported sequences.
  
   
 0.724
XM1_1625
Homologs of previously reported genes of unknown function.
  
     0.704
XM1_0710
Homologs of previously reported genes of unknown function.
  
     0.697
XM1_0443
Putative defective integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family.
  
   
 0.683
XM1_0488
Conserved protein of unknown function （Phage_integrase fragment） Homologs of previously reported genes of unknown function; Belongs to the 'phage' integrase family.
  
   
 0.620
XM1_2807
Protein of unknown function (Integrase-like, catalytic core 244-428); No homology to any previously reported sequences.
  
   
 0.577
XM1_2961
Protein of unknown function; No homology to any previously reported sequences.
       0.553
XM1_0722
Homologs of previously reported genes of unknown function; Belongs to the 'phage' integrase family.
  
   
 0.506
XM1_1624
Homologs of previously reported genes of unknown function.
 
     0.464
XM1_0709
Homologs of previously reported genes of unknown function.
 
     0.462
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.