STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3022Conserved protein of unknown function(containing TniQ domain,13-142); Homologs of previously reported genes of unknown function. (179 aa)    
Predicted Functional Partners:
XM1_3023
AAA domain-containing protein; Homologs of previously reported genes of unknown function.
 
 
 0.970
XM1_3025
Conserved protein of unknown function(containing TnsA endonuclease, N-terminal domain,23-94); Homologs of previously reported genes of unknown function.
 
     0.944
XM1_3024
Transposase; Function of strongly homologous gene; enzyme.
 
     0.937
XM1_3020
Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.665
XM1_3021
Conserved protein of unknown function(containing Putative transposase IS4/IS5 family domain,21-95); Homologs of previously reported genes of unknown function.
       0.665
XM1_1584
Conserved protein of unknown function (TnsA endonuclease, N-terminal 44-119; Homologs of previously reported genes of unknown function.
 
     0.559
XM1_4043
Putative phage DNA transposition protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
 
 0.499
XM1_2653
Homologs of previously reported genes of unknown function.
  
     0.491
XM1_2661
Homologs of previously reported genes of unknown function.
  
     0.430
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.