STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3097Protein of unknown function; No homology to any previously reported sequences. (194 aa)    
Predicted Functional Partners:
XM1_4190
Putative transcriptional regulator, Crp/Fnr family (fragment; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.576
XM1_3098
Putative diguanylate phosphodiesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.477
XM1_3099
Putative chromate transporter (ChrA-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.477
XM1_2734
Putative Phenylacetyl CoA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.463
XM1_1873
Phenylacetyl-CoA:acceptor oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.452
XM1_4023
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator; Function of strongly homologous gene; enzyme.
  
     0.418
XM1_0900
Putative dimethyl sulfoxide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.408
XM1_1540
Putative molybdopterin oxidoreductase(Molybdopterin oxidoreductase,61-472); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.408
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.