STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3118Conserved protein of unknown function(containing Azospirillum phage Cd, Gp10 domain,13-85); Homologs of previously reported genes of unknown function. (87 aa)    
Predicted Functional Partners:
XM1_1954
Conserved protein of unknown function（Stringent starvation protein B,13-127） Homologs of previously reported genes of unknown function.
  
   
 0.781
XM1_3496
Conserved protein of unknown function(containing DUF1013 domian,34-169); Homologs of previously reported genes of unknown function.
  
   
 0.755
XM1_3132
Conserved protein of unknown function(containing Lipoprotein SmpA/OmlA domain,31-106;); Homologs of previously reported genes of unknown function.
  
   
 0.738
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.736
ftsQ
Cell division protein FtsQ（Cell division protein FtsQ/DivIB,172-288） Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.710
XM1_0270
Putative double-strand break repair protein, AddB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.705
XM1_1173
Homologs of previously reported genes of unknown function.
  
     0.693
lolA
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.673
XM1_1411
Putative Glutathione S-transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.651
XM1_0826
Homologs of previously reported genes of unknown function.
  
     0.622
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.