STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3132Conserved protein of unknown function(containing Lipoprotein SmpA/OmlA domain,31-106;); Homologs of previously reported genes of unknown function. (152 aa)    
Predicted Functional Partners:
XM1_1967
Uncharacterized protein; Homologs of previously reported genes of unknown function.
  
 
 
 0.931
bamA
Putative outer membrane protein assembly factor; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 
 0.897
bamD
Outer membrane protein assembly factor BamD(Outer membrane protein assembly factor BamD,14-245); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.882
lolA
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
 
 
 0.774
XM1_3131
Protein of unknown function; No homology to any previously reported sequences.
       0.773
XM1_0875
Homologs of previously reported genes of unknown function.
  
     0.767
XM1_1954
Conserved protein of unknown function（Stringent starvation protein B,13-127） Homologs of previously reported genes of unknown function.
  
   
 0.752
XM1_3118
Conserved protein of unknown function(containing Azospirillum phage Cd, Gp10 domain,13-85); Homologs of previously reported genes of unknown function.
  
   
 0.738
XM1_0270
Putative double-strand break repair protein, AddB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.720
XM1_3134
Protein of unknown function; No homology to any previously reported sequences.
 
     0.696
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.