STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3237HD-GYP domain-containing protein; Homologs of previously reported genes of unknown function. (390 aa)    
Predicted Functional Partners:
mepA
Penicillin-insensitive murein endopeptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.784
XM1_1318
Putative Response regulator（GGDEF domain,147-323） Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.659
XM1_2647
Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.633
XM1_3971
Putative diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.623
XM1_4485
Putative diguanylate cyclase (GGDEF) domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.602
XM1_4334
Putative response regulator containing a CheY-like receiver domain and a GGDEF domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.552
XM1_1708
Putative diguanylate cyclase (GGDEF) domain(Adenylyl cyclase class-3/4/guanylyl cyclase, 154-322); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.522
XM1_0567
Uncharacterized protein; Homologs of previously reported genes of unknown function.
 
 
 0.518
XM1_3295
GGDEF domain-containing protein; Homologs of previously reported genes of unknown function.
 
 
 
 0.490
XM1_3238
Putative AMP-dependent synthetase/acyl-CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.489
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.