STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3261Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (592 aa)    
Predicted Functional Partners:
XM1_3259
Membrane-fusion protein; Function of strongly homologous gene; membrane component.
 
 0.977
XM1_2521
Putative Type I secretion membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 0.903
XM1_1662
Putative Membrane-fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 0.902
XM1_4166
Putative type I secretion membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 0.893
XM1_0272
Putative Type I secretion system membrane fusion protein PrsE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
 0.889
XM1_3260
Putative ABC transporter related; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
    
0.855
pstB-3
Phosphate import ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
      0.711
XM1_0271
Conserved protein of unknown function,containing haemolysin-type calcium-binding domain NodA; Homologs of previously reported genes of unknown function.
 
  
 0.689
XM1_2170
Outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.674
XM1_4163
Putative Poly(Beta-D-mannuronate) C5 epimerase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.674
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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