STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3265Conserved protein of unknown function(containing ACT domain,94-143); Homologs of previously reported genes of unknown function. (170 aa)    
Predicted Functional Partners:
putA
Fused DNA-binding transcriptional regulator; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
       0.809
XM1_3266
Protein of unknown function; No homology to any previously reported sequences.
       0.784
XM1_3297
Protein of unknown function; No homology to any previously reported sequences.
  
     0.691
XM1_0317
Homologs of previously reported genes of unknown function.
  
     0.660
XM1_1462
Homologs of previously reported genes of unknown function.
  
     0.635
XM1_2902
Conserved protein of unknown function (Ferritin/ribonucleotide reductase-like 15-157); Homologs of previously reported genes of unknown function.
  
    0.614
XM1_1985
Homologs of previously reported genes of unknown function.
  
     0.611
XM1_1257
ABC transporter; Function of strongly homologous gene; transporter.
  
     0.605
XM1_2135
Hemerythrin-like protein; Homologs of previously reported genes of unknown function.
  
     0.594
XM1_4236
Homologs of previously reported genes of unknown function.
  
     0.593
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.