STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3374FGE-sulfatase domain-containing protein; Homologs of previously reported genes of unknown function. (263 aa)    
Predicted Functional Partners:
XM1_3373
Conserved protein of unknown function(containing Pentapeptide repeat-like domain,50-157); Homologs of previously reported genes of unknown function.
 
     0.758
XM1_2652
Putative Phenolpthiocerol synthesis polyketide synthase ppsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.510
XM1_2700
Putative Serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.479
XM1_2559
Putative Wd40 repeat, subgroup; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.446
XM1_4783
Putative serine/threonine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.428
hemB
Delta-aminolevulinic acid dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ALAD family.
       0.417
XM1_3575
Putative transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.416
XM1_3991
ABC-type antimicrobial peptide transport system, ATPase component; Function of strongly homologous gene; transporter.
  
  
 0.416
XM1_1558
Putative Serine/threonine protein kinase (Protein kinase-like domain,1-269); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.411
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.