STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3390Conserved membrane protein of unknown function(containing RDD domain;36-164); Homologs of previously reported genes of unknown function. (176 aa)    
Predicted Functional Partners:
motB
Flagellar motor protein; Function of strongly homologous gene; cell process.
       0.818
motA
Proton conductor component of flagella motor; Function of homologous gene experimentally demonstrated in an other organism; cell process.
       0.751
XM1_0209
Homologs of previously reported genes of unknown function.
 
   
 0.733
hslR
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit; Function of strongly homologous gene; factor.
  
    0.651
ate
arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
     
 0.633
XM1_1531
Conserved protein of unknown function (Flagellin, D0/D1 domain); Homologs of previously reported genes of unknown function.
  
 
   0.626
XM1_2050
Putative Predicted membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.621
XM1_0773
Homologs of previously reported genes of unknown function.
  
     0.556
XM1_2769
Putative Periplasmic protein TonB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.523
XM1_3633
Protein of unknown function; No homology to any previously reported sequences.
  
     0.517
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.