STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfB-3Electron transfer flavoprotein beta-subunit; Function of strongly homologous gene; enzyme. (250 aa)    
Predicted Functional Partners:
XM1_0727
Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.991
etfA-3
Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.989
etfA
Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.957
etfA-2
Electron transfer flavoprotein alpha-subunit; Function of strongly homologous gene; enzyme.
 0.957
etfA-4
Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.957
XM1_3447
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.912
fadH
2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.809
XM1_3444
Putative AMP-dependent synthetase/ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.795
XM1_0350
Putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 
 0.708
XM1_2744
Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.680
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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