STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3447Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (592 aa)    
Predicted Functional Partners:
etfA-3
Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.941
XM1_3444
Putative AMP-dependent synthetase/ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.919
etfB-3
Electron transfer flavoprotein beta-subunit; Function of strongly homologous gene; enzyme.
  
 
 0.912
fadB
3-hydroxyacyl-CoA dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.801
XM1_3399
Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; enzyme.
  
 0.757
etfA
Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.752
etfA-2
Electron transfer flavoprotein alpha-subunit; Function of strongly homologous gene; enzyme.
 
 0.752
etfA-4
Electron transfer flavoprotein alpha-subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.751
XM1_0727
Putative electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
 
 
 0.682
phbA
Acetyl-CoA acetyltransferase phbA; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.662
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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