STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY-5Chemotaxis protein CheY,regulator of chemotaxis and motility; Function of homologous gene experimentally demonstrated in an other organism; regulator. (124 aa)    
Predicted Functional Partners:
XM1_0440
Putative inhibitor of MCP methylation, CheC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
 0.927
XM1_4558
Putative histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.873
XM1_3449
Signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
 
   0.861
cheA
Uncharacterized protein; Function of strongly homologous gene; enzyme.
  
 0.847
cheA-2
Signal transduction histidine Kinases (STHK); Function of strongly homologous gene; putative regulator.
 
 0.833
cheY-6
CheY-like receiver protein,regulator of chemotaxis and motility; Function of strongly homologous gene; regulator.
 
     0.822
XM1_3452
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 
0.787
XM1_2326
CheY-like receiver; Function of strongly homologous gene; regulator.
  
     0.761
XM1_3450
CheX domain-containing protein; Homologs of previously reported genes of unknown function.
      0.757
XM1_2673
Putative Histidine Sensor Kinase CheA3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.752
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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