STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3475Conserved protein of unknown function(containing HATPase_c_2 domain,104-235); Homologs of previously reported genes of unknown function. (241 aa)    
Predicted Functional Partners:
XM1_3474
STAS domain-containing protein; Homologs of previously reported genes of unknown function.
  
 
 0.918
XM1_4227
Putative anti-sigma regulatory factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
 
 0.829
XM1_4525
Conserved protein of unknown function, containing STAS (AntiSigma factor antagonist) domain; Homologs of previously reported genes of unknown function.
 
 
 0.810
XM1_4523
Conserved protein of unknown function (CheY-like superfamily 45-202; Homologs of previously reported genes of unknown function.
 
 
 0.791
XM1_2666
Conserved protein of unknown function, containing STAS (AntiSigma factor antagonist) domain; Homologs of previously reported genes of unknown function; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.778
XM1_3114
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.749
XM1_1829
Putative antisigma-factor antagonist STAS(STAS domain,1-99) Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
 
 0.748
XM1_4319
Putative signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.748
XM1_2915
Homologs of previously reported genes of unknown function.
  
   0.744
XM1_2061
Putative Signal transduction histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.740
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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