Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| XM1_2122 | XM1_3154 | XM1_2122 | XM1_3154 | Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.933 |
| XM1_2122 | cbbM | XM1_2122 | XM1_3514 | Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.909 |
| XM1_2122 | cbbZ | XM1_2122 | XM1_1905 | Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Phosphoglycolate phosphatase（2-phosphoglycolate phosphatase, prokaryotic,8-218） Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.923 |
| XM1_3154 | XM1_2122 | XM1_3154 | XM1_2122 | Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.933 |
| XM1_3154 | cbbM | XM1_3154 | XM1_3514 | Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.909 |
| XM1_3154 | cbbZ | XM1_3154 | XM1_1905 | Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Phosphoglycolate phosphatase（2-phosphoglycolate phosphatase, prokaryotic,8-218） Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.914 |
| cbbM | XM1_2122 | XM1_3514 | XM1_2122 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.909 |
| cbbM | XM1_3154 | XM1_3514 | XM1_3154 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.909 |
| cbbM | cbbY | XM1_3514 | XM1_1798 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Haloacid dehalogenase-like hydrolase, protein CbbY, plasmid(HAD-like domain,1-211); Function of strongly homologous gene; enzyme. | 0.706 |
| cbbM | cbbZ | XM1_3514 | XM1_1905 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Phosphoglycolate phosphatase（2-phosphoglycolate phosphatase, prokaryotic,8-218） Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | 0.924 |
| cbbM | fda | XM1_3514 | XM1_2006 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Fructose-1,6-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.618 |
| cbbM | metH | XM1_3514 | XM1_0268 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.601 |
| cbbM | paaY | XM1_3514 | XM1_3491 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Transferase involved in phenylacetate degradation; Function of strongly homologous gene; enzyme. | 0.682 |
| cbbM | pgk | XM1_3514 | XM1_0164 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Conserved protein of unknown function (YtkA like domain 25-108); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phosphoglycerate kinase family. | 0.919 |
| cbbM | prkB | XM1_3514 | XM1_3513 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Phosphoribulokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.996 |
| cbbM | yrdA | XM1_3514 | XM1_3632 | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | Carbonic anhydrase/acetyltransferase; Function of strongly homologous gene; enzyme. | 0.682 |
| cbbY | cbbM | XM1_1798 | XM1_3514 | Haloacid dehalogenase-like hydrolase, protein CbbY, plasmid(HAD-like domain,1-211); Function of strongly homologous gene; enzyme. | Ribulose bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type II subfamily. | 0.706 |
| cbbY | prkB | XM1_1798 | XM1_3513 | Haloacid dehalogenase-like hydrolase, protein CbbY, plasmid(HAD-like domain,1-211); Function of strongly homologous gene; enzyme. | Phosphoribulokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.564 |
| cbbZ | XM1_2122 | XM1_1905 | XM1_2122 | Phosphoglycolate phosphatase（2-phosphoglycolate phosphatase, prokaryotic,8-218） Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | Putative Phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.923 |
| cbbZ | XM1_3154 | XM1_1905 | XM1_3154 | Phosphoglycolate phosphatase（2-phosphoglycolate phosphatase, prokaryotic,8-218） Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. | Putative Phosphatases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.914 |
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