STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XM1_3525Histidine kinase domain-containing protein; Homologs of previously reported genes of unknown function. (460 aa)    
Predicted Functional Partners:
XM1_4283
Two-component system, OmpR family, response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.823
divK-3
Putative Polar-differentiation response regulator DivK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 0.819
XM1_2326
CheY-like receiver; Function of strongly homologous gene; regulator.
 
 
 0.817
phoB
Two-component system, OmpR family, phosphate regulon response regulator PhoB; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.816
XM1_4673
Putative response regulator transcriptional regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.814
ompR
DNA-binding response regulator in two-component regulatory system with EnvZ; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 
 0.797
XM1_4425
Putative two component transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.791
XM1_3442
Two-component response regulator; Function of strongly homologous gene; regulator.
 
 
 0.788
cheY-6
CheY-like receiver protein,regulator of chemotaxis and motility; Function of strongly homologous gene; regulator.
 
 
 0.784
XM1_4554
Putative chemotaxis regulator CheY; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
   
 0.783
Your Current Organism:
Magnetospirillum sp. XM1
NCBI taxonomy Id: 1663591
Other names: M. sp. XM-1, Magnetospirillum sp. XM-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.